eSlide

Open Source in Pathology

General Information

Open Source Initiative: basic information on open source, definitions, licenses, etc
GNU GPL: the GNU General Public License
LinuxMedNews: news about open source in Health Care

Open Source for telepathology

iPath: an open source system for (static) telepathology; its user community
TelemedMail: a specialised client for email-based telemedicine

Open Source for Whole Slide Imaging

eSlide: software suite for digital slide acquisition and visualization
LargeMontage: U. of Tampere tool for mosaicing
NCMIR large field light microscopy software: montage, manual and automatic alignment

Open Source for Image Processing and Analysis

ImageJ
µManager
MBF ImageJ for Microscopy: ImageJ plugins collection
UCSD Confocal Microscopy plugins
NCMIR large field light microscopy software: montage, manual and automatic alignment
CivilCapture: a plugin for image acquisition on Windows, MacOSX and Linux
FishJ: an ImageJ plugin for automated FISH analysis
CamAcqJ: ImageJ acquisition plugin for QImgaing Retiga cameras

Open Source for Tissue Micro Arrays

Stanford TMA: management and anaysis of tissue micro arrays, based on other tools (Treeview, Excel, etc)
TMAJ: management, analysis, etc., developed in Java
TIMAN: web based system for management of tissue micro array, but not analysis

Contacts

You can contact us at suite at eslide.net.